- Open Access
APOE ε4, Alzheimer’s disease neuropathology and sleep disturbance, in individuals with and without dementia
Alzheimer's Research & Therapy volume 14, Article number: 47 (2022)
Apolipoprotein E epsilon 4 (APOE-ε4) carrier status is an established risk factor for Alzheimer’s disease (AD) dementia. It has also been linked with sleep disturbance in healthy older adults and increased insomnia risk. This association may be driven by the effect of APOE-ε4 on AD pathological change, itself associated with sleep abnormalities. To assess this relationship, we have evaluated post-mortem neuropathological findings in patients with and without cognitive impairment and AD pathology, who had extensive clinical assessment within 12 months of death.
This retrospective cohort study used UK Brain Banks Network data. Eligible subjects were aged over 50, with pre-mortem neuropsychiatry inventory scores of sleep disturbance (NPI-K), neurocognitive testing and functional cognitive status assessment (Clinical Dementia Rating scale). Neuropathological data included Thal phase, Braak stage and CERAD scores (measures of Aβ plaque distribution, tangle distribution and neuritic plaque density, respectively) combined to form the National Institute on Aging Alzheimer’s Association (NIA-AA) ABC score reflecting AD neuropathology. Participants with other significant intracerebral pathology or pathological features of non-AD dementia were excluded.
Multivariate linear regression was performed with NPIK Global Score (NPIK frequency score multiplied by severity score) as the dependent variable and APOE-ε4 heterozygosity or homozygosity as independent variables. Covariates included age, gender, APOE-ε2 status and ABC NPI measures reflecting depression and anxiety. Further models stratified by ABC score and functional cognitive status were also produced.
Seven hundred twenty-eight records were identified. Two hundred two participants were included in the final analysis: mean (SD) age 84.0 (9.2) and MMSE 14.0 (11.8). Mean sleep disturbance scores were highest in ε4 homozygosity (n=11), 4.55 (5.4); intermediate in ε4 heterozygosity (n=95), 2.03 (4.0); and lowest in non-ε4 carriers (n=96), 1.36 (3.3). Within the full sample, controlling for pathological status, age, gender, depression, anxiety and CDR-SOB status, APOE-ε4 homozygosity was associated with sleep disturbance (β 2.53, p=0.034). APOE-ε4 heterozygosity was similarly associated in individuals without dementia (β 1.21, p=0.048).
These findings lend weight to the hypothesis that APOE-ε4 affects sleep by mechanisms independent of AD pathological change. Evaluation of those mechanisms would enhance understanding of sleep disturbance pathways and potentially provide treatment targets.
Relative to the common ε3 allele of apolipoprotein E (APOE ε3), the ε4 allele is an established risk factor for the development of sporadic and late-onset familial Alzheimer’s disease (AD) [1,2,3]. Within predominantly Caucasian populations, increasing allele dose is positively associated with AD risk, with ε4 heterozygosity conferring an odds ratio (OR) of approximately 3 and ε4 homozygosity an OR of approximately 14 . APOE ε4 also lowers the age of onset in a similarly allele-number-dependent manner, with one allele advancing onset by 2–5 years and two by 5–10 years  although such relationships appear weaker in African-American populations [6,7,8].
Multiple mechanisms have been proposed through which APOE ε4 may exert these effects . Apolipoprotein E4 (ApoE4) affects amyloid beta (Aβ) metabolism, predisposing to its extracellular deposition as amyloid plaques [10,11,12] and to more severe cerebral amyloid angiopathy [13,14,15,16]. Whilst effects on Aβ are hypothesised to represent the dominant pathway, proteolytic ApoE4 cleavage resulting from stress or injury also predisposes to tau hyperphosphorylation and neurofibrillary tangle (NFT) formation . ApoE4 has further been associated with disruption to glucose metabolism [18,19,20], blood-brain barrier integrity , cerebrovascular function , lipid transport , synaptic function  and inflammatory responses  as well as neuronal toxicity and α-synuclein/TDP-43 pathologies [26, 27].
Multiple studies have also linked APOE ε4 to sleep disturbance: specifically, objective sleep disturbance in healthy older adults , an increased risk of insomnia  and obstructive sleep apnoea/sleep-disordered breathing in both adults [30, 31] and children . Improved sleep was reported to attenuate the negative effect of ε4 on incident AD . Additionally, ε4 has been proposed as a mediator of the relationship between sleep and cognitive decline, both obstructive sleep apnoea (OSA) and APOE ε4 impairing cognitive performance [34,35,36]. However, whilst possession of ε2 reduces the odds of developing AD [37, 38], this allele has been linked with increased likelihood of OSA .
Sleep disturbance, whilst traditionally associated with established AD disease [40,41,42], is detectable prior to the emergence of symptoms [43,44,45] and plays a potentially causative role in AD pathogenesis [46,47,48]. Therefore, APOE ε4 could influence AD incidence and progression through the effects of this allele on sleep. Establishing this categorically is complicated by the influence of ApoE4 on the pathological hallmarks of AD themselves detectable decades prior to symptomatic presentation with cognitive impairment  and also associated with sleep disturbance. Hippocampal and Entorhinal Cortex deposition of NFTs found in early Braak stages  have been associated with an increased likelihood of sleep disturbance . AD pathology within the suprachiasmatic nuclei and the ventrolateral preoptic area has also been implicated in sleep disturbance [52, 53] with hippocampal Aβ burden in otherwise healthy adults correlating significantly with impairments in non-random eye movement (NREM) slow wave activity generation and showed a trend towards deterioration in macro-architectural sleep parameters .
Here, we have tested the hypothesis that APOE ε4 allele count increases sleep disturbance in people with and without cognitive impairment, independently of its influence on the two major hallmark AD pathologies (Aβ plaques and tau neurofibrillary tangles). We have controlled for the extent of AD pathological change by the gold standard of post-mortem neuropathological assessment  according the 2012 National Institute on Aging-Alzheimer’s Association Guidelines  and have excluded individuals with other significant intracerebral pathology.
This retrospective cohort study used data obtained for participants in the Brains for Dementia Research (BDR) Programme (https://www.brainsfordementiaresearch.org.uk/) and held on the UK Brain Banks Network (UKBBN) database. The database holds demographic and neuropathological details of donated brains, processed and assessed according to detailed and comprehensive post-mortem protocols, as well as clinical assessments undertaken prior to post-mortem as part of the BDR project established in 2007. This links 5 brain banks across the UK (London, Oxford, Newcastle, Bristol and Manchester) with common protocols for consent, tissue handling and quality indicators. Volunteers were recruited via posters, radio adverts, presentations to groups/clubs and signposted via Alzheimer’s Research UK and Alzheimer’s Society charities. The population comprises many healthy participants with a positive family history of dementia and also participants with a diagnosis of dementia . See Table 1 for inclusion and exclusion criteria.
A spectrum of histopathological findings is represented, ranging from healthy tissue to marked AD neuropathological changes, in individuals both with and without clinical AD dementia. Included participants had full APOE genotyping.
Sleep disturbance was measured by component K of the neuropsychiatric inventory (NPI-K) . These score responses provided by an informant, caregiver or study partner including increased latency, increased wake time after sleep onset, wandering, early morning wakening, excessive daytime sleep and sleep-wake cycle disturbance. A global score was obtained by multiplying frequency and severity domains (see Table 2).
Each participant had undergone post-mortem analysis of CERAD neuritic plaque stage, Thal Aβ plaque stage and Braak NFT stage allowing for calculation of the National Institute on Aging-Alzheimer’s Association ABC Score . The combination of A, B and C score determine the extent of AD neuropathological change, designated “Not”, “Low”, “Intermediate” and “High”.
For data cleaning and analysis, we used R Studio v3.6.3 statistical software. Raw scores were used throughout. Demographic and clinical variables were tested across groups for normality and compared made using Kruskal-Wallis and Pearson chi-squared tests. All tests of significance were two-tailed with α = 0.05.
Descriptive statistic was produced with unadjusted means of sleep disturbance by APOE ε4 status. These were calculated for the whole population before being stratified by NIAA-AA ABC score and CDR status. A fourth unadjusted comparison stratified the whole population into four phenotypically separate groups categorised by low CDR (0/0.5) or high CDR (1/2/3) and low ABC score (none/low) or high ABC score (intermediate/high). These groups are termed ‘Healthy’ (low CDR and low ABC), ‘Other Cognitive Impairment’ (high CDR and low ABC), ‘Alzheimer’s Disease’ (low CDR and high ABC) and ‘Alzheimer’s dementia’ (high CDR and high ABC).
The primary outcome measure was determined by multivariate linear regression with NPI-K Sleep Disturbance Global Score as the dependent variable. Crude and adjusted analyses were performed including dummy variables reflecting APOE ε4 allele copy number, with 0 as reference. Covariates were introduced to an adjusted model to control for APOE ε2 allele number, age, gender, CDR sum of boxes (CDR-SOB) and neuropsychiatry inventory measures of depression and anxiety. Dummy variables were created to reflect NIAA-AA ABC neuropathological stages. All regression models were checked for multicollinearity with variance inflation factors < 10. The study is powered at 80% to detect an effect size of f2 = 0.088 (n = 202, α = 0.05).
As a post hoc sensitivity analysis, these regressions were repeated in groups stratified by NIAA-AA ABC score and CDR status.
Initial database search yielded n = 728 BDR cases, of which n = 202 fulfilled our criteria for analysis (See Fig. 1).
Selected participants had a mean age of 84.0 years (SD = 9.2), 51.0% were male, mean CDR 1.8 (SD = 1.3) and mean Mini-Mental State Examination (MMSE) score 14.0 (SD = 11.8). Baseline demographics of the study population stratified by APOE-ε4 allele count (non-ε4 carriers n = 96, ε4 heterozygotes n = 95, ε4 homozygotes n = 11) are shown in Table 3. There were statistically significant differences in AD ABC stage, mean MMSE and mean CDR scores.
Sleep disturbance by APOE ε4 status
Crude sleep disturbance scores in the cohort stratified by ε4 are shown in Table 4. There were statistically significant increases in all neuropsychiatry inventory measures of sleep disturbance between those with 2 vs 0 alleles. Severity, frequency and caregiver distress domains were also significantly higher in those with 2 vs 1 allele. There were increased caregiver distress scores only in those with 1 allele compared with 0.
Positive trends between ε4 allele number and increasing mean NPIK sleep disturbance score were across the full-cohort irrespective of stratification by CDR status, ABC score of neuropathological change and clinical classification (Fig. 2).
Full multivariate linear regression revealed a statistically significant effect of APOE ε4 homozygosity on global scores of sleep disturbance (β 2.53, p=0.034) controlling for AD pathological status, ε2 carrier status, age, gender, depression, anxiety and CDR-SOB status. A positive trend was found for ε4 heterozygosity in both crude (β 0.67, p=0.221) and adjusted (β 0.41, p=0.471) analyses, although neither reached statistical significance (see Table 5).
Further, multivariate regression testing additional models were performed post hoc (Supplementary Material Table 1). Whilst the effect size estimates for APOE ε4 status within these models differed, overall trends and statistical significance remained unaltered. To further assess the independent effects of APOE ε4 status, further multivariate regressions were performed after stratification of the cohort by neuropathological change and CDR status (Tables 6 and 7). Positive trends between APOE ε4 status and sleep disturbance were seen in all stratified groups. Sleep disturbance was significantly associated with ε4 heterozygosity in the group without clinical dementia (CDR 0/0.5) (β 1.28, p=0.024) and with ε4 homozygosity in the relatively cognitively impaired group (CDR 1/2/3) (β 2.95, p=0.045).
In this large, community-based cohort, APOE ε4 homozygosity was independently associated with sleep disturbance after controlling for the extent of AD neuropathological change, age, gender and affective symptoms, in individuals both with and without dementia. Homozygosity conferred a 2.53 (±1.18) mean point increase in NPI-K global sleep disturbance score. A non-significant trend towards an increased score was also noted with APOE ε4 heterozygosity, which conferred a 0.41-mean point increase in sleep disturbance score. Within the group without dementia (CDR 0/0.5), ε4 heterozygosity conferred a statistically significant increase in sleep disturbance score of 1.21 points.
Understanding of the relationship between ApoE status and sleep disturbance continues to evolve. Shortening of rapid-eye-movement (REM) sleep in individuals with MCI was significantly more apparent in carriers than non-carriers of the ε4 allele . However, such differences extend beyond populations affected by cognitive impairment. Objective sleep disturbance in healthy adults as measured by polysomnography and actigraphy was found to be independently associated with the presence of the ε4 allele . Furthermore, in a study that controlled for demographic variables, the ε4 allele was associated with insomnia in those both with and without psychiatric disorders . Improved sleep attenuated the increased risk of AD development conferred by possession of ε4, in particular modifying its effect on neurofibrillary tangle formation . Conversely, ε4 carriers with dementia were found to have slower rates of sleep disturbance progression than non-carriers  albeit in a small cohort. Our findings support previous findings indicating that people with one or more APOE ε4 alleles are likely to have more impaired sleep but add to these findings by controlling for the severity of Alzheimer’s disease pathology as determined neuropathologically. There are a range of potential explanations for these findings:
Apo E4-mediated AD pathological change
APOE ε4 is thought to influence AD pathology  through enhanced Aβ deposition , tau phosphorylation and neurotoxicity [62, 63], all of which may lead to sleep abnormalities . For example, in participants with AD, APOE ε4 allele status influences CSF measures of tauopathy, itself associated with night-time behaviour disturbance . We have found that ε4 influences sleep independently of Aβ and tau stage. Hence, as well as its impact on these hallmark features of AD, APOE ε4 may also influence AD risk through other neurotoxic pathways and/or loss of neuroprotective functions  that have the potential to influence sleep quality (Fig. 3).
Apo E4-mediated effects on melatonin
In a study of 85 patients with AD, APOE ε4 homozygosity compared with heterozygosity was associated with significantly reduced post-mortem CSF melatonin (32pg/ml ± 8 vs 71 ± 7, p=0.02) . Reduced melatonin has been linked to sundown syndrome in dementia [67, 68], and replacement improves symptoms according to systematic review . However, melatonin is up to five times higher in healthy adults compared with those with AD [66, 67], and it is plausible that APOE ε4 may be associated with reduced melatonin via secondary mechanisms linked to AD severity as opposed to direct effects.
Apo E4-mediated sleep disordered breathing
APOE ε4 was reported to be directly associated with OSA and symptomatic sleep disordered breathing , possession of this allele being associated with an approximate doubling of risk for apnoea-hypoxic index > 15 [OR 2.0 (1.2–3.5)] in adults and separately in children . Two main mechanisms for a causal relationship were proposed. Firstly, an ε4-associated increase in respiratory/sleep centre tau or amyloid burden may drive centrally mediated sleep disordered breathing . Alternatively, (or additionally) ApoE4 has a central role in lipid metabolism  mediating lipoprotein to cell surface receptor binding, increasing plasma low-density lipoprotein (LDL) levels and accelerating atherogenesis . Centrally mediated sleep disordered breathing is recognised in a wide range of cerebral pathologies , including cerebrovascular pathology that might be exacerbated by possession of ε4. A further plausible mechanism, given that APOE ε4 predisposes to metabolic syndrome  and increased insulin resistance  would be through secondary increased obesity; however, ε4 carriers on average have a lower body mass index than do ε3 or ε2 carriers [75, 76]. A systematic review found no support for a causal association between APOE ε4 allele and OSA [OR 1.13 (0.86–1.47)] , but the authors commented that the studies were heterogeneous, may not have accommodated important gene-gene interactions and may have been underpowered.
Apo E4-mediated cerebral atrophy
Previous work linked possession of ε4 with accelerated age-related cortical thickness loss [78, 79]. This itself was associated with self-reported sleep disturbance in healthy community dwelling adults  and reduced objectively measured total sleep time, random eye movement, N2 and N3 stages of sleep in alcohol-use disorder .
Apo E4 effects on functional cerebral activity
Baseline activity within the Default Mode Network (DMN)—the distributed network of brain regions more active during rβ and characterised by high functional connectivity—is greater in APOE ε4 carriers than in non-carriers [82,83,84]. This overactivity was hypothesised to inhibit brain structures stimulating sleep initiation as described within the ‘failure to inhibit wakefulness’ hypothesis of sleep onset [85, 86]. Whilst the mechanism for this is uncertain, the findings extend to young adults aged 20–35, underlining a potential active role for ε4 outside of established AD pathology .
Study strengths and limitations
This study is subject to several limitations. Firstly, the sample, whilst deeply characterised, was limited by small numbers in the APOE-e4 homozygous group and relatively small numbers within each neuropathological group within the heterozygous group limiting power to detect full effects. Linked to this, p values of ‘statistically significant’ findings were close to 0.05. Reassuringly, however, the sleep disturbance signal was positively correlated with allele number. Participants in the BDR cohort are mostly from less socially and economically deprived parts of the UK  and are not therefore fully representative of the general population in the UK. Medication history was not comprehensive enough for inclusion in our analysis and may represent a significant confounder with prescribed sleep medications ameliorating or masking symptoms. Systemic illness that could have impacted on sleep disturbance may not have been detected post-mortem.
The use of the neuropsychiatry inventory sleep disturbance score as principal outcome measure is a further potential weakness. Whilst broad and encompassing a heterogeneous range of disorders, it relies on caregiver report and is therefore potentially subject to bias, e.g., false negative reports of subtle changes. However, it is well-validated, widely used and its reliance on a semi-objective caregiver as opposed to subjective personal reports also has advantages. Outcome scores for this study were obtained within 12 months of death. At the more distant end of this scale, pathological changes could have evolved between clinical data collection and autopsy; however, recall bias from retrospective data collection is eliminated.
Strengths include the categorisation of participants and quantification of AD changes based on the gold standard of post-mortem neuropathology with application of strict exclusion criteria, allowing for the effects of AD pathology to be largely determined in isolation. Data collected as part of the BDR project is standardised and collected as part of a detailed and comprehensive protocol. The population also reflected a range of AD pathology, with 38.2% of the study population recording ABC Scores of ‘Not’ or ‘Low’.
APOE ε4 homozygosity was associated with sleep disturbance, independent of AD pathological change and clinical functional status. Neuropathologically validated clinical studies often provide the first impetus in developing improved understanding of underlying mechanisms of neurological disease. There are a range of plausible mechanisms by which this effect of APOE ε4 may be exerted; further systematic testing of which would enhance understanding of sleep disturbance pathways and may subsequently provide treatment targets for this distressing symptom, also linked to AD progression.
Availability of data and materials
The dataset used and analysed in this current study are available from the first author on reasonable request.
Apolipoprotein E epsilon 4
Brains for Dementia Research
Clinical Dementia Rating
Clinical Dementia Rating–sum of boxes
Central nervous system
Default Mode Network
Mini-Mental State Examination
National Institute on Aging and Alzheimer’s Association
Neuropsychiatry Inventory Measure of Sleep Disturbance
Non-random eye movement
Obstructive sleep apnoea
Transactive response DNA binding protein–43
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The Brains for Dementia Research (BDR) Programme (https://www.brainsfordementiaresearch.org.uk/) and UK Brain Banks Network (UKBBN) database for collecting and holding data used in this study.
JB receives funding from Alzheimer’s Research UK (supported by the Margaret Jost Fellowship and the Don Thoburn Memorial Scholarship), and the David Telling Charitable Trust and EC has received funding from BRACE and ARUK (Bristol & Bath Network).
Ethics approval and consent to participate
The Brains for Dementia Research project has been approved by Newcastle & North Tyneside 1 Research Ethics Committee to function as a research tissue bank. Access to the participant data was provided by the UK Brain Banks Network data access Committee and the Brains for Dementia Research data access committee. The participants provided their written informed consent to participate in the Brains for Dementia Research programme.
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The authors declare that they have no competing interests.
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Blackman, J., Love, S., Sinclair, L. et al. APOE ε4, Alzheimer’s disease neuropathology and sleep disturbance, in individuals with and without dementia. Alz Res Therapy 14, 47 (2022). https://doi.org/10.1186/s13195-022-00992-y
- Cognitive impairment