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Segmentation of medial temporal subregions reveals early right-sided involvement in semantic variant PPA



Semantic variant of primary progressive aphasia (svPPA) is a subtype of frontotemporal dementia characterized by asymmetric temporal atrophy.


We investigated the pattern of medial temporal lobe atrophy in 24 svPPA patients compared to 72 controls using novel approaches to segment the hippocampal and amygdalar subregions on MRIs. Based on semantic knowledge scores, we split the svPPA group into 3 subgroups of early, middle and late disease stage.


Early stage: all left amygdalar and hippocampal subregions (except the tail) were affected in svPPA (21–35% smaller than controls), together with the following amygdalar nuclei in the right hemisphere: lateral, accessory basal and superficial (15–23%). On the right, only the temporal pole was affected among the cortical regions. Middle stage: the left hippocampal tail became affected (28%), together with the other amygdalar nuclei (22–26%), and CA4 (15%) on the right, with orbitofrontal cortex and subcortical structures involvement on the left, and more posterior temporal lobe on the right. Late stage: the remaining right hippocampal regions (except the tail) (19–24%) became affected, with more posterior left cortical and right extra-temporal anterior cortical involvement.


With advanced subregions segmentation, it is possible to detect early involvement of the right medial temporal lobe in svPPA that is not detectable by measuring the amygdala or hippocampus as a whole.


Semantic variant of primary progressive aphasia (svPPA) is a subtype of frontotemporal dementia (FTD), characterized clinically by anomia and impaired single-word comprehension. It is associated with a characteristic pattern of asymmetrical antero-inferior temporal lobe atrophy [1,2,3]. Previous studies of svPPA have shown early left medial temporal lobe involvement, with both hippocampal and amygdalar atrophy [4,5,6]. However, these studies have investigated the whole hippocampus or amygdala and no previous studies have looked at the subregions of the medial temporal lobe. In this study, we therefore aimed to investigate the pattern of atrophy of the subregions of the hippocampus and the amygdala in svPPA, focusing on the involvement at different stages in order to understand the areas involved early in the disease process.


We reviewed the UCL Dementia Research Centre FTD MRI database to identify patients with a diagnosis of svPPA [7] and a usable 3 T T1-weighted magnetic resonance (MR) scan. Twenty-four patients were identified, all with left-temporal predominant disease. Seventy-two cognitively normal subjects with a usable volumetric 3 T T1-weighted MRI were identified as controls. The study was approved by the local ethics committee, and written informed consent was obtained from all participants. The study was conducted in accordance with the Helsinki Declaration of 1975.

Based on their scores on a test of semantic knowledge (the British Picture Vocabulary Scale, BPVS, a word-picture matching task) [8], we split the svPPA patients into three equal subgroups (n = 8 per group) of early (BPVS > 110/150), middle (BPVS = 55–110/150) and late disease stage (BPVS < 55/150). Patients were negative for mutations in all FTD-related genes. Two patients received post-mortem confirmation of the underlying neuropathology, both TDP-43 type C.

All patients underwent a detailed neuropsychological examination including tests of fluid intelligence (WASI Matrices), single-word comprehension (WASI Vocabulary), naming (Graded Naming Test), reading (National Adult Reading Test), verbal memory (Recognition Memory Test for Words), visual memory (Recognition Memory Test for Faces), short-term memory (forwards digit span), working memory (backwards digit span), calculation (Graded Difficulty Calculation Test), visuoperceptual function (Visual Object and Space Perception battery Object Decision subtest) and executive function (inhibition—D-KEFS Color-Word Ink Naming Test; abstract reasoning—WASI Similarities). A percentile score based on standard norms was generated for each patient, with a mean percentile score created for the early, middle and late stage groups. Assessment of behavioural symptoms was performed using the revised version of the Cambridge Behavioural Inventory (CBI-R) [9]: six subscores were used (difficulties with self-care, abnormal sleep, hallucinations/delusions, disinhibition, abnormal eating behaviour, obsessive-compulsive behaviour, apathy and loss of empathy) with a percentage of the total possible subscore generated for every patient; for each stage, a mean percentage score was created. We report the cognitive and behavioural profiles at each stage for illustrative purposes (Fig. 1 and Additional file 1: Table S1).

Fig. 1

Pattern of atrophy in amygdalar subnuclei, hippocampal subfields, cortical regions and subcortical structures across early, middle and late stages of svPPA. Colour bar denotes the percent difference in volume from controls that remained significant after correction for multiple comparisons. For illustrative purposes, we have included the changes in cognition [mean percentile scores] and behavioural changes [mean percentage score in each Cambridge Behavioural Inventory subscore] that occur at these stages. The length of the segment indicates the severity of the profile. Specifically, for the cognitive performance, the smaller the segment, the worse the performance, whilst for the behavioural symptoms, the bigger the segments, the worse the symptoms

T1-weighted MRIs were acquired using a 3-T scanner, either a Trio (Siemens, Erlangen, Germany, TR = 2200 ms, TI = 900 ms, TE = 2.9 ms, acquisition matrix = 256 × 256, spatial resolution = 1.1 mm) or a Prisma (Siemens, Erlangen, Germany, TR = 2000 ms, TI = 850 ms, TE = 2.93 ms, acquisition matrix = 256 × 256, spatial resolution = 1.1 mm). Individuals with moderate to severe vascular disease or space-occupying lesions were excluded.

Volumetric MRI scans were first bias field corrected and whole-brain parcellated using the geodesic information flow (GIF) algorithm [10], which is based on atlas propagation and label fusion. The hippocampal subfields and amygdalar subregions were subsequently segmented using a customized version of the module available in FreeSurfer 6.0 [11, 12], to adapt the output of GIF to the FreeSurfer format. For the hippocampal subfields, we focused on seven areas: CA1, CA2/CA3, CA4, dentate gyrus, subiculum, presubiculum and the tail. We excluded from the analysis the hippocampus-amygdala transition area, the parasubiculum, the molecular layer of the hippocampus, the fimbria and the hippocampal fissure, as they were too small, or not reliably delineated on T1-weighted images. For the amygdalar subnuclei, we focused the analysis on five regions, by combining the smallest subnuclei, based on an anatomical subdivision [13]: lateral nucleus, basal and paralaminar nucleus, accessory basal nucleus, cortico-amygdaloid transition area and the superficial nuclei (central nucleus, cortical nucleus, medial nucleus, anterior amygdaloid area).

For comparison with the medial temporal subregions, we extracted volumes of the following cortical regions from GIF: temporal (medial, lateral, supratemporal, temporal pole), frontal (orbitofrontal, prefrontal), parietal, occipital, insular and cingulate (anterior and posterior). We also extracted volumes of subcortical structures for the pallidum, putamen, caudate, nucleus accumbens and thalamus.

Left and right volumes were corrected for total intracranial volume (TIV), computed with SPM12 v6470 (Statistical Parametric Mapping, Wellcome Trust Centre for Neuroimaging, London, UK) running under Matlab R2014b (Math Works, Natick, MA, USA) [14]. All segmentations were visually checked for quality.

Statistical analyses were performed on brain volumes (as a percentage of TIV) in STATA v14 (Stata-Corp, College Station, TX), between control and patients (early, middle and late stage groups), using a linear regression test adjusting for scanner type, TIV, gender and age. The results were corrected for multiple comparisons (Bonferroni correction): p < 0.006 for amygdalar subnuclei and subcortical structures, p < 0.005 for hippocampal subfields and p < 0.0035 for cortical regions.


No significant age difference was seen between any of the svPPA groups and controls [Early: 66.9 (5.5) years, Middle: 64.5 (9.5), Late: 64.2 (5.5); Controls: 61.0 (12.1)], p = 0.112, t test. However, there was a significant difference in gender distribution across stages [Early: 88% male, Middle: 63% male, Late: 25% male; Controls: 40% male], p = 0.032, Chi-square test.

Amygdalar subnuclei, hippocampal subfields, cortical regions, subcortical structures, neuropsychology performance and behavioural symptoms at each stage are shown in Fig. 1.

Early stage

All the left amygdalar and hippocampal subregions (except for the tail) were affected (24–35% and 21–27% smaller than controls, p < 0.0005) at this stage, together with the right lateral, accessory basal and superficial nuclei of the amygdala (15–23%, p < 0.004) (Table 1).

Table 1 Volumetry of amygdalar subnuclei, hippocampal subfields, cortical regions and subcortical structures

Outside of the medial temporal lobe, on the left, all the temporal cortical regions (19–47%, p < 0.0005) were affected as well as the anterior cingulate (18%, p = 0.001) and insula (24%, p < 0.0005). The left nucleus accumbens was the only other subcortical structure affected (13%, p < 0.0005). Apart from the affected amygdalar subnuclei, the only other right hemisphere structure affected at this stage was the temporal pole (13%, p = 0.006).

Cognitively, patients showed severely impaired naming already, with relatively preserved working memory, abstract reasoning and fluid intelligence. Behavioural symptoms were mild and mainly related to abnormal eating behaviour, apathy and abnormal sleep.

Middle stage

At this stage, the left hippocampal tail became affected (28%, p < 0.0005), together with the other right amygdalar nuclei (22–26%, p < 0.0005) and the right CA4 region of the hippocampus (15%, p = 0.003).

Cortically, the left orbitofrontal lobe was affected at this stage along with more posterior temporal structures on the right: lateral and medial temporal cortices (9–12%, p < 0.0005). Subcortically, the left pallidum and putamen were affected (12–17%, p < 0.0005) and the right pallidum (8%).

Cognitively, single-word comprehension and reading became increasingly impaired, but working memory, short-term memory and abstract reasoning remained relatively intact. Behavioural symptoms increased with the presence of obsessive-compulsive behaviour and loss of empathy as well as abnormal eating behaviour, apathy and disinhibition.

Late stage

In the late stage, the remaining right hippocampal regions (except the tail) (19–24%, p < 0.001) became affected.

Cortically, spread to the left prefrontal and parietal cortices was seen whilst on the right, the insula (30%) and supratemporal cortex (13%, p < 0.004) were affected. Subcortically, the left caudate, thalamus and right nucleus accumbens, caudate and putamen were affected (12–15%).

At this stage, all cognitive domains were severely impaired except for short-term and working memory, abstract reasoning and fluid intelligence. Severe behavioural symptoms were seen.


Using advanced subregional segmentation, we were able to detect early involvement in the right hemisphere in svPPA, with progression of atrophy through the medial temporal lobes as the disease moves from early to middle to late stage.

Extensive medial temporal atrophy is seen on the left in most amygdalar and hippocampal subregions at the earliest stage of svPPA, co-incidental with the involvement of all of the temporal cortices on the left. This is consistent with previous studies showing that even at first clinical presentation, significant left temporal lobe atrophy is present [1, 15].

Previous studies have not shown early involvement of the right medial temporal structures. In this study, the earliest subnuclei affected on the right were the accessory basal, lateral and superficial nuclei of the amygdala. These subnuclei are interconnected and receive input from the temporal pole and the hippocampus (also affected on the right in the early stage) as well as other parts of the temporal and frontal cortices and the nucleus accumbens [13, 16]. The ability to use advanced subregional segmentation techniques in this study allows early detection of right medial temporal atrophy.

The cognitive and behavioural correlates of the individual right amygdalar subnuclei are poorly studied, but prior studies of the whole amygdala implicate the right side as being important in the processing of emotional information [17, 18]. In our study, loss of empathy is mildly affected at the earliest stage (Fig. 1): this is likely to represent an impairment of self-knowledge, a process that requires the linking of emotions with semantics, and has previously been shown to be associated with right temporal lobe atrophy including the amygdala [19]. The particular amygdalar subnuclei affected early are part of the limbic network and therefore likely to be intrinsically involved in emotion processing [16].

Of all the medial temporal subregions, the hippocampal tail is preserved until the later stages of svPPA. This is in line with previous studies, where the posterior temporal lobe is spared and an antero-posterior gradient is present [20, 21]. Indeed, svPPA patients typically show intact episodic memory and spatial navigation, functions typically linked to the hippocampal tail. Consistent with the theory of svPPA as a network-opathy [22], the first hippocampal region to become affected on the right is CA4, an area highly connected to the temporal cortex and amygdala [23].

Limitations of the study include using cross-sectional data with staging of the disease by impairment on a task of semantic knowledge and the small number of svPPA cases. Further studies would benefit from the analysis of longitudinal data from a larger sample to see whether the same pattern is seen. Despite the gold standard still being manual segmentation of dedicated MRIs or on brain tissue post-mortem, these automated methods included in this study have been previously validated and proven reliable to delineate the subregions on T1-MRI (Dice coefficients > 0.86; ICC 0.88–0.93) [10,11,12, 24, 25]. Moreover, in this study, we carefully excluded small subregions and combined together groups of nuclei to improve the anatomical validity. Automated segmentations will play a key role in the future, as manual segmentations are likely to be unfeasible for large cohorts of patients.


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The Dementia Research Centre is supported by Alzheimer’s Research UK, Brain Research Trust and The Wolfson Foundation. This work was supported by the NIHR Queen Square Dementia Biomedical Research Unit and the NIHR UCL/H Biomedical Research Centre, the MRC UK GENFI grant (MR/M023664/1) and the Alzheimer’s Society (AS-PG-16-007). JDR is supported by an MRC Clinician Scientist Fellowship (MR/M008525/1) and has received funding from the NIHR Rare Disease Translational Research Collaboration (BRC149/NS/MH). JDW was supported by a Wellcome Trust Senior Clinical Fellowship (091673/Z/10/Z), and his research is supported by the Alzheimer’s Society, Alzheimer’s Research UK and the NIHR UCLH Biomedical Research Centre. SO is funded by the Engineering and Physical Sciences Research Council (EP/H046410/1, EP/J020990/1, EP/K005278), the Medical Research Council (MR/J01107X/1), the EU-FP7 project VPH-DARE@IT (FP7- ICT-2011-9- 601055) and the National Institute for Health Research University College London Hospitals Biomedical Research Centre (NIHR BRC UCLH/UCL High Impact Initiative JEI is supported by the European Research Council (Starting Grant 677697, project BUNGEE-TOOLS). MAS acknowledges the financial support by the EPSRC-funded UCL Centre for Doctoral Training in Medical Imaging (EP/L016478/1).

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The datasets used and analysed during the current study are available from the corresponding author on reasonable request.

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MB drafted the body of the manuscript, tables and figures and ran the analyses. JDR contributed to the design and concept of the study. JEI contributed to the data analyses. LLR, CVG, CRM, JDW and JDR were responsible for the collection of data and recruitment of patients. All authors critically reviewed and approved the final manuscript and contributed to the data interpretation.

Corresponding author

Correspondence to Jonathan D. Rohrer.

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This study was approved by the London Queen Square NRES Committee. Written informed consent was obtained from all participants.

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Competing interests

JDR has been on a Medical Advisory Board for Wave Life Sciences and Ionis Pharmaceuticals. All other authors declare that they have no competing interests.

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Additional file

Additional file 1:

Table S1. Cognitive and behavioural variables for the svPPA patients. p values denote significance on Kruskal-Wallis test among the three groups. (DOCX 17 kb)

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Bocchetta, M., Iglesias, J.E., Russell, L.L. et al. Segmentation of medial temporal subregions reveals early right-sided involvement in semantic variant PPA. Alz Res Therapy 11, 41 (2019).

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  • Semantic variant PPA
  • Magnetic resonance imaging
  • Medial temporal subregions