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Table 2 Expression of genes upregulated by full-length ApoER2 overexpression

From: The apolipoprotein receptor LRP3 compromises APP levels

Symbol

Gene name

Genomic location

Function

logFC

adj p

LRP3

Low-density lipoprotein receptor-related protein 3

19q13.11

Internalization of lipophilic molecules and/or signal transduction

Precise role is unclear

0.48

0.047

LDLR

Low-density lipoprotein receptor

19p13.2

Mediates endocytosis of cholesterol-rich LDL

0.43

0.018

APOL1

apolipoprotein L, 1

22q12.3

Minor apoprotein component of HDL

1.28

0.003

INSIG1

Insulin-induced gene 1

7q36.3

Regulation of cholesterol cell concentration

0.72

0.001

DHCR24

24-Dehydrocholesterol reductase

1p32.3

Cholesterol metabolic process

0.35

0.008

MVK

Mevalonate kinase

12q24.11

Cholesterol metabolic process

 

0.33

0.019

  1. Genes associated with lipid binding and transport, and cholesterol metabolism, whose transcripts were upregulated in ApoER2 overexpressing SH-SY5Y cells compared with control cells transfected with an empty vector. The expression of the genes was analyzed on DNA microarrays. The fold change (logFC) in gene expression between samples and controls, as well the adj p (p value adjusted for multiple testing) is indicated