From: A novel age-informed approach for genetic association analysis in Alzheimer’s disease
SNP (hg19) / gene | Discovery | Replication | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LogReg | LinReg | CoxReg | LogReg | LinReg | CoxReg | |||||||||||||
OR | P | m | exp(β) | P | m | HR | P | m | OR | P | m | exp(β) | P | m | HR | P | m | |
1:200959302:G:A / KIF21B | 0.87 | 2.10−4 | 2 | 0.90 | 5.10−6 | B2 | 0.89 | 5.10−6 | 2 | 0.96 | 0.13 | 1 | 0.96 | 0.01 | B1 | 0.96 | 0.02 | 2 |
1:216270469:G:A / USH2A | 9.12 | 4.10−3 | 2 | 6.76 | 4.10−8 | B1 | 4.07 | 8.10−9 | 2 | 1.58 | 0.14 | 1 | 1.70 | 0.04 | A1 | 1.33 | 0.12 | 1 |
2:26332640:T:C / RAB10 | 17.4 | 0.06 | 1 | 10.46 | 2.10−15 | B1 | 4.92 | 5.10−7 | 1 | 4.50 | 0.05 | 1 | 5.03 | 2.10−3 | B1 | 2.69 | 6.10−4 | 1 |
6:41129252:C:T / TREM2 | 4.83 | 3.10−10 | 1 | 3.22 | 2.10−27 | A1 | 2.58 | 1.10−23 | 1 | 2.32 | 2.10−9 | 1 | 2.69 | 1.10−14 | A1 | 1.95 | 2.10−18 | 2 |
7:99971313:T:C / PILRA | 0.88 | 2.10−5 | 1 | 0.87 | 6.10−8 | A2 | 0.90 | 9.10−7 | 2 | 0.92 | 6.10−5 | 1 | 0.90 | 2.10− 7 | B1 | 0.93 | 5.10−7 | 1 |
11:59945745:T:C / MS4A6A | 0.88 | 9.10−6 | 1 | 0.91 | 1.10−6 | B1 | 0.92 | 1.10−5 | 1 | 0.89 | 1.10−8 | 1 | 0.89 | 3.10−12 | A1 | 0.93 | 2.10−8 | 1 |
14:93022240:G:T / RIN3 | 16.3 | 7.10−3 | 2 | 6.54 | 6.10−11 | A2 | 3.46 | 4.10−7 | 2 | 1.95 | 0.04 | 2 | 1.69 | 0.02 | A2 | 1.59 | 0.01 | 2 |
16:29998200:A:G / TAOK2 | 1.12 | 6.10−5 | 1 | 1.08 | 3.10−7 | A1 | 1.09 | 6.10−6 | 2 | 1.04 | 0.07 | 2 | 1.05 | 1.10−3 | B1 | 1.05 | 4.10−4 | 2 |
17:44828931:G:A / NSF/MAPT/KANSL1 | 0.85 | 5.10−6 | 2 | 0.89 | 5.10−8 | B2 | 0.89 | 7.10−7 | 2 | 0.97 | 0.20 | 2 | 0.97 | 0.06 | B2 | 0.98 | 0.18 | 2 |
19:1047507:AGGAGCAG:A / ABCA7 | 3.36 | 1.10−4 | 2 | 2.18 | 3.10−7 | A1 | 1.94 | 1.10−6 | 1 | 1.36 | 0.12 | 1 | 1.33 | 0.07 | B2 | 1.22 | 0.13 | 2 |