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Table 1 Brain regions included in structural and functional connectomes

From: Early brain connectivity alterations and cognitive impairment in a rat model of Alzheimer’s disease

Region Structural connectome Functional connectome
Right Left Right Left
Accumbens 1 39 1 28
Amygdala 2 40 2 29
Anterior commissure and bed nucleus 3 41
Caudate putamen and globus pallidus 4 42 3 30
Corpus callosum 5 43
Auditory cortex 6 44 4 31
Cingulate cortex 7 45 5 32
Entorhinal cortex 8 46 6 33
Frontal association cortex 9 47 7 34
Insular cortex 10 48 8 35
Medial prefrontal cortex 11 49 9 36
Motor cortex 12 50 10 37
Orbitofrontal cortex 13 51 11 38
Parietal association and somatosensory cortex 14 52 12 39
Piriform cortex 15 53 13 40
Retrosplenial cortex 16 54 14 41
Temporal association cortex 17 55 15 42
Visual cortex 18 56 16 43
Septum and diagonal band 19 57 17 44
Hippocampus anterodorsal 20 58 18 45
Hippocampus posterior 21 59 19 46
Hippocampus subiculum 22 60 20 47
Hippocampus ventral and hypothalamus lateral 23 61 21 48
Hypothalamus medial and ventral tegmental area 24 62 22 49
Internal capsule 25 63
Interstitial nucleus of the posterior limb of the anterior commissure, olfactory nuclei, substantia innominata, and ventral pallidum 26 64 23 50
Medial geniculate 27 65
Mesencephalic region 28 66
Olfactory tubercle 29 67 24 51
Periaqueductal gray 30 68
Pons 31 69
Raphe 32 70
Substantia nigra 33 71
Superior colliculus 34 72 25 52
Thalamus dorsolateral 35 73 26 53
Thalamus midline dorsal and ventromedial 36 74 27 54
Zona incerta 37 75
Fimbria 38 76
  1. Region name based on previous publication [42] and right and left hemisphere region indexes in the structural and/or functional connectomes